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mioC protein (Idiomarina loihiensis) - STRING interaction network
"mioC" - Flavodoxin in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mioCFlavodoxin (149 aa)    
Predicted Functional Partners:
gidA
NAD/FAD-utilizing enzyme apparently involved in cell division; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (631 aa)
   
   
  0.730
argH
Argininosuccinate lyase (620 aa)
     
 
    0.725
dnaA
DNA replication initiation ATPase; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (454 aa)
   
   
  0.715
cysK
Cysteine synthase (350 aa)
   
 
  0.665
cysM
Cysteine synthase B (321 aa)
   
 
  0.662
IL2632
Serine/threonine protein phosphatase (165 aa)
              0.651
IL2157
Homoserine O-acetyltransferase (392 aa)
     
        0.564
IL2013
Homoserine acetyltransferase (302 aa)
     
        0.564
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (206 aa)
   
   
  0.488
polA
DNA polymerase I (921 aa)
           
  0.416
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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