STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOO47491.1Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
KOO47490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.770
KOO47488.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.584
KOO47492.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
KOO47489.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
KOO50237.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
KOO47467.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
KOO50453.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Bacillus koreensis
NCBI taxonomy Id: 284581
Other names: B. koreensis, Bacillus koreensis Lim et al. 2006, Bacillus sp. BR030, DSM 16467, KCTC 3914, strain BR030
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.