Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOO40333.1 | KOO40363.1 | AMD01_21530 | AMD01_21100 | AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system. | 0.554 |
| KOO40356.1 | KOO40359.1 | AMD01_21065 | AMD01_21080 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| KOO40356.1 | KOO40360.1 | AMD01_21065 | AMD01_21085 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.882 |
| KOO40356.1 | KOO40361.1 | AMD01_21065 | AMD01_21090 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.750 |
| KOO40356.1 | KOO40362.1 | AMD01_21065 | AMD01_21095 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.756 |
| KOO40356.1 | KOO40363.1 | AMD01_21065 | AMD01_21100 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system. | 0.526 |
| KOO40356.1 | KOO40399.1 | AMD01_21065 | AMD01_21105 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antitoxin endoai; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| KOO40359.1 | KOO40356.1 | AMD01_21080 | AMD01_21065 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| KOO40359.1 | KOO40360.1 | AMD01_21080 | AMD01_21085 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| KOO40359.1 | KOO40361.1 | AMD01_21080 | AMD01_21090 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
| KOO40359.1 | KOO40362.1 | AMD01_21080 | AMD01_21095 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.956 |
| KOO40359.1 | KOO40363.1 | AMD01_21080 | AMD01_21100 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system. | 0.508 |
| KOO40359.1 | KOO40399.1 | AMD01_21080 | AMD01_21105 | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antitoxin endoai; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| KOO40360.1 | KOO40356.1 | AMD01_21085 | AMD01_21065 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.882 |
| KOO40360.1 | KOO40359.1 | AMD01_21085 | AMD01_21080 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| KOO40360.1 | KOO40361.1 | AMD01_21085 | AMD01_21090 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KOO40360.1 | KOO40362.1 | AMD01_21085 | AMD01_21095 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| KOO40360.1 | KOO40363.1 | AMD01_21085 | AMD01_21100 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system. | 0.512 |
| KOO40360.1 | KOO40364.1 | AMD01_21085 | AMD01_21110 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.458 |
| KOO40360.1 | KOO40399.1 | AMD01_21085 | AMD01_21105 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antitoxin endoai; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |
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