STRINGSTRING
XP_445236.1 protein (Candida glabrata) - STRING interaction network
"XP_445236.1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_445236.1Hypothetical protein (639 aa)    
Predicted Functional Partners:
XP_447213.1
Hypothetical protein (1135 aa)
     
  0.958
XP_448421.1
Hypothetical protein (1346 aa)
   
 
  0.895
XP_448993.1
Hypothetical protein (513 aa)
     
  0.851
XP_449889.1
Hypothetical protein (299 aa)
     
  0.846
BBP
Hypothetical protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5’-UACUAAC-3’), the pyrimidine tract and the 3’-splice site at the 3’-end of introns (By similarity) (465 aa)
     
  0.846
XP_449184.1
Hypothetical protein (118 aa)
     
  0.841
XP_445536.1
Hypothetical protein (533 aa)
     
  0.830
PRP45
Hypothetical protein; Involved in pre-mRNA splicing (414 aa)
     
  0.825
PAB1
Hypothetical protein; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through trans [...] (579 aa)
     
  0.820
XP_447635.1
Hypothetical protein (602 aa)
     
  0.820
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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