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CEF1 protein (Candida glabrata) - STRING interaction network
"CEF1" - Hypothetical protein in Candida glabrata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEF1Hypothetical protein; Involved in pre-mRNA splicing and cell cycle control (541 aa)    
Predicted Functional Partners:
SYF1
Hypothetical protein; Involved in pre-mRNA splicing and cell cycle progression (835 aa)
     
  0.995
CLF1
Hypothetical protein; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity) (695 aa)
     
  0.995
PRP46
Hypothetical protein; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M (427 aa)
     
  0.994
ISY1
Hypothetical protein; Involved in pre-mRNA splicing (203 aa)
     
  0.993
PRP45
Hypothetical protein; Involved in pre-mRNA splicing (414 aa)
     
  0.992
SLT11
Hypothetical protein; Involved in pre-mRNA splicing. Facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome. Binds to RNA (By similarity) (364 aa)
     
  0.991
XP_447213.1
Hypothetical protein (1135 aa)
     
  0.991
XP_445536.1
Hypothetical protein (533 aa)
     
  0.991
XP_449571.1
Hypothetical protein (421 aa)
     
  0.991
CWC2
Hypothetical protein; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases [...] (306 aa)
     
  0.990
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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