STRINGSTRING
XP_446234.1 protein (Candida glabrata) - STRING interaction network
"XP_446234.1" - Hypothetical protein in Candida glabrata
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_446234.1Hypothetical protein (277 aa)    
Predicted Functional Partners:
XP_449871.1
Hypothetical protein (805 aa)
       
 
  0.867
SPT5
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (1010 aa)
       
 
  0.614
CWC21
Hypothetical protein; Involved in pre-mRNA splicing. May function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome. May do so by stabilizing the catalytic center or the position of the RNA substrate (By similarity) (143 aa)
       
      0.583
XP_448567.1
Hypothetical protein (363 aa)
       
 
  0.512
XP_447540.1
Hypothetical protein (233 aa)
       
 
  0.485
SSU72
Hypothetical protein; Processively dephosphorylates Ser-5 of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1) (204 aa)
     
 
  0.476
XP_447542.1
Hypothetical protein (90 aa)
     
        0.454
SNU71
Hypothetical protein; Component of the U1 snRNP particle, which recognizes and binds the 5’-splice site of pre-mRNA. Together with other non- snRNP factors, U1 snRNP forms the spliceosomal commitment complex, that targets pre-mRNA to the splicing pathway (By similarity) (613 aa)
       
      0.443
XP_449889.1
Hypothetical protein (299 aa)
       
      0.416
XP_447810.1
Hypothetical protein (312 aa)
     
 
  0.411
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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