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SNU71 protein (Candida glabrata) - STRING interaction network
"SNU71" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNU71Hypothetical protein; Component of the U1 snRNP particle, which recognizes and binds the 5’-splice site of pre-mRNA. Together with other non- snRNP factors, U1 snRNP forms the spliceosomal commitment complex, that targets pre-mRNA to the splicing pathway (By similarity) (613 aa)    
Predicted Functional Partners:
XP_449889.1
Hypothetical protein (299 aa)
     
 
  0.955
XP_449142.1
Hypothetical protein (410 aa)
     
 
  0.949
XP_449008.1
Hypothetical protein (590 aa)
     
 
  0.949
CWC21
Hypothetical protein; Involved in pre-mRNA splicing. May function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome. May do so by stabilizing the catalytic center or the position of the RNA substrate (By similarity) (143 aa)
     
 
  0.937
XP_447672.1
Hypothetical protein (508 aa)
     
 
  0.933
XP_448835.1
Hypothetical protein (605 aa)
     
 
  0.915
XP_449083.1
Hypothetical protein (248 aa)
     
 
  0.911
XP_448694.1
Hypothetical protein (544 aa)
     
 
  0.901
XP_448700.1
Hypothetical protein (477 aa)
       
 
  0.901
XP_448387.2
Hypothetical protein (861 aa)
     
 
  0.894
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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