STRINGSTRING
PXR1 protein (Candida glabrata) - STRING interaction network
"PXR1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PXR1Hypothetical protein; Involved in rRNA-processing at A0, A1 and A2 sites and regulates negatively telomerase (288 aa)    
Predicted Functional Partners:
XP_446633.1
66S preribosome component MAK16 (297 aa)
     
   
  0.946
XP_446005.1
66S preribosome component MAK16 (310 aa)
     
        0.946
XP_446885.1
Hypothetical protein (294 aa)
     
        0.926
XP_446467.1
Hypothetical protein (371 aa)
     
      0.814
XP_445805.1
Hypothetical protein (263 aa)
     
        0.786
XP_449319.1
Hypothetical protein (682 aa)
     
        0.784
SDA1
Hypothetical protein (745 aa)
     
        0.784
SPB1
Hypothetical protein; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (837 aa)
     
        0.784
RRP36
Hypothetical protein; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (313 aa)
     
        0.781
ROK1
Hypothetical protein; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (565 aa)
     
   
  0.774
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
Server load: low (6%) [HD]