STRINGSTRING
RFA1 protein (Candida glabrata) - STRING interaction network
"RFA1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFA1Hypothetical protein (627 aa)    
Predicted Functional Partners:
XP_449520.1
Hypothetical protein (279 aa)
     
  0.998
XP_446186.1
Hypothetical protein (772 aa)
     
  0.993
XP_447986.1
Hypothetical protein (972 aa)
     
  0.985
XP_447899.1
Hypothetical protein (879 aa)
     
  0.984
XP_447242.1
Hypothetical protein (514 aa)
     
  0.978
XP_447348.1
Hypothetical protein (1512 aa)
     
  0.977
RAD52
Hypothetical protein; Involved in DNA double-strand break (DSB) repair and recombination. Promotes the annealing of complementary single- stranded DNA and by stimulation of the RAD51 recombinase (By similarity) (505 aa)
     
  0.976
XP_447585.1
Hypothetical protein; Component of the post-replicative DNA mismatch repair system (MMR) (957 aa)
     
  0.975
XP_447490.1
Hypothetical protein (383 aa)
   
  0.973
MEC1
Hypothetical protein; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Recruited to DNA lesions in order to initiate the DNA repair by homologous recombination. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, also involved in the regulation of DNA damage response mechanism. Required for cell growth and meiotic recombination (By similarity) (2379 aa)
     
  0.972
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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