STRINGSTRING
XP_446954.1 protein (Candida glabrata) - STRING interaction network
"XP_446954.1" - Hypothetical protein in Candida glabrata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_446954.1Hypothetical protein (474 aa)    
Predicted Functional Partners:
XP_448127.1
Hypothetical protein (131 aa)
   
  0.998
NOP58
Hypothetical protein; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (513 aa)
   
 
  0.997
NOP1
rRNA methyltransferase NOP1; S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins. Involved in pre-rRNA processing. Utilizes the methyl donor S-adenosyl-L- methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in pre-ribosomal RNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. Also acts as a protein methyltransferase by mediating methylation of ’Gln-105’ of h [...] (323 aa)
   
 
  0.996
XP_448939.1
Hypothetical protein (255 aa)
     
 
  0.995
XP_444941.1
Hypothetical protein (508 aa)
   
 
  0.995
GAR1
Hypothetical protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs (By similarity) (222 aa)
     
  0.994
XP_448896.1
Hypothetical protein (712 aa)
     
 
  0.994
XP_447221.1
Hypothetical protein (519 aa)
     
 
  0.988
NOP10
Hypothetical protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs (By similarity) (57 aa)
     
  0.979
NOG1
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (645 aa)
     
 
  0.975
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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