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RLP7 protein (Candida glabrata) - STRING interaction network
"RLP7" - Hypothetical protein in Candida glabrata
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RLP7Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit. May act as a specificity factor that binds precursor rRNAs and tethers the enzymes that carry out the early 5’ to 3’ exonucleolytic reactions that generate the mature rRNAs (By similarity) (317 aa)    
Predicted Functional Partners:
XP_449514.1
60S ribosomal protein L25 (142 aa)
   
  0.998
XP_449464.1
60S ribosomal protein L5 (297 aa)
   
  0.998
XP_448200.1
40S ribosomal protein S3 (247 aa)
   
  0.998
XP_448104.1
60S ribosomal protein L35 (120 aa)
   
  0.997
XP_446408.1
60S ribosomal protein L26 (127 aa)
   
  0.997
XP_448163.1
60S ribosomal protein L28 (149 aa)
   
  0.997
RPL16A
60S ribosomal protein L16 (200 aa)
   
  0.997
RPL11
60S ribosomal protein L11; Binds to 5S ribosomal RNA (174 aa)
   
  0.997
XP_448774.1
60S ribosomal protein L10 (221 aa)
   
  0.997
RPL2
60S ribosomal protein L2 (254 aa)
   
  0.997
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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