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TRM5 protein (Candida glabrata) - STRING interaction network
"TRM5" - Hypothetical protein in Candida glabrata
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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TRM5Hypothetical protein; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (498 aa)    
Predicted Functional Partners:
XP_445935.1
Hypothetical protein (800 aa)
     
   
  0.586
XP_445330.1
Hypothetical protein (134 aa)
     
 
  0.558
XP_448312.1
Hypothetical protein (672 aa)
     
   
  0.543
TRM7
Hypothetical protein; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (309 aa)
     
   
  0.533
XP_445051.1
Hypothetical protein (553 aa)
     
   
  0.527
TRM61
Hypothetical protein; Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (374 aa)
     
   
  0.526
XP_449643.1
Hypothetical protein; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3’-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha- carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (415 aa)
     
   
  0.523
XP_445681.1
Hypothetical protein (269 aa)
   
   
  0.515
FMNAT
Hypothetical protein (304 aa)
 
 
   
  0.499
TRM10
Hypothetical protein; S-adenosyl-L-methionine-dependent guanine N(1)- methyltransferase that catalyzes the formation of N(1)- methylguanine at position 9 (m1G9) in cytoplasmic tRNA (287 aa)
     
   
  0.496
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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