STRINGSTRING
PUB1 protein (Candida glabrata) - STRING interaction network
"PUB1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUB1Hypothetical protein (416 aa)    
Predicted Functional Partners:
XP_447213.1
Hypothetical protein (1135 aa)
     
  0.958
XP_448993.1
Hypothetical protein (513 aa)
     
  0.851
BBP
Hypothetical protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5’-UACUAAC-3’), the pyrimidine tract and the 3’-splice site at the 3’-end of introns (By similarity) (465 aa)
     
  0.850
XP_449889.1
Hypothetical protein (299 aa)
     
  0.846
XP_449184.1
Hypothetical protein (118 aa)
     
  0.839
XP_445536.1
Hypothetical protein (533 aa)
     
  0.834
PRP45
Hypothetical protein; Involved in pre-mRNA splicing (414 aa)
     
  0.825
LEA1
Hypothetical protein; Involved in pre-mRNA splicing (266 aa)
       
  0.819
SYF1
Hypothetical protein; Involved in pre-mRNA splicing and cell cycle progression (835 aa)
       
  0.800
XP_445832.1
Hypothetical protein (696 aa)
     
  0.800
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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