STRINGSTRING
XP_447338.1 protein (Candida glabrata) - STRING interaction network
"XP_447338.1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_447338.1Hypothetical protein (309 aa)    
Predicted Functional Partners:
XP_447350.1
Hypothetical protein (2414 aa)
       
  0.950
XP_449736.1
Hypothetical protein (456 aa)
       
    0.947
XP_449287.1
Hypothetical protein (2140 aa)
       
  0.945
XP_446387.1
Hypothetical protein (1956 aa)
       
  0.945
XP_447672.1
Hypothetical protein (508 aa)
     
    0.931
XP_445285.1
Hypothetical protein (165 aa)
     
  0.929
XP_447236.1
Hypothetical protein (861 aa)
       
  0.928
XP_444965.1
Hypothetical protein (363 aa)
       
      0.908
XP_447128.1
Hypothetical protein (1089 aa)
       
  0.875
PRP28
Hypothetical protein; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5’-splice site duplex to permit an effective competition for the 5’-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5’-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity) (582 aa)
       
  0.845
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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