STRINGSTRING
XP_447596.1 protein (Candida glabrata) - STRING interaction network
"XP_447596.1" - Ribosome biogenesis protein BRX1 in Candida glabrata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_447596.1Ribosome biogenesis protein BRX1 (294 aa)    
Predicted Functional Partners:
XP_448788.1
Hypothetical protein (387 aa)
     
 
  0.997
DBP9
Hypothetical protein; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (595 aa)
     
 
  0.996
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (457 aa)
     
 
  0.996
XP_448939.1
Hypothetical protein (255 aa)
     
 
  0.996
XP_448146.1
Hypothetical protein (619 aa)
     
 
  0.995
MRT4
mRNA turnover protein MRT4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (239 aa)
     
 
  0.994
XP_446885.1
Hypothetical protein (294 aa)
     
 
  0.993
XP_447378.1
Pumilio-family RNA binding domain-containing protein (667 aa)
     
      0.993
XP_449224.1
Hypothetical protein (349 aa)
     
 
  0.993
ERB1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (805 aa)
     
 
  0.992
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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