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RPL16A protein (Candida glabrata) - STRING interaction network
"RPL16A" - 60S ribosomal protein L16 in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL16A60S ribosomal protein L16 (200 aa)    
Predicted Functional Partners:
RPS16
40S ribosomal protein S16 (143 aa)
 
  0.999
XP_448200.1
40S ribosomal protein S3 (247 aa)
   
  0.998
XP_445777.1
60S ribosomal protein L18 (159 aa)
   
  0.998
RPL7
60S ribosomal protein L7 (244 aa)
   
  0.998
RPL2
60S ribosomal protein L2 (254 aa)
   
  0.998
RPL3
60S ribosomal protein L3 (387 aa)
   
  0.998
XP_449464.1
60S ribosomal protein L5 (297 aa)
   
  0.998
XP_445155.1
60S ribosomal protein L4 (362 aa)
   
  0.998
XP_449630.1
40S ribosomal protein S9 (194 aa)
 
  0.998
XP_447035.1
40S ribosomal protein S9 (194 aa)
 
  0.998
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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