STRINGSTRING
SUM1 protein (Candida glabrata) - STRING interaction network
"SUM1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUM1Hypothetical protein (617 aa)    
Predicted Functional Partners:
XP_446553.1
Hypothetical protein (751 aa)
       
  0.908
RFM1
Hypothetical protein (308 aa)
       
 
  0.808
XP_447081.1
Hypothetical protein (1169 aa)
       
      0.603
XP_445407.1
Hypothetical protein; NAD-dependent deacetylase. Heterochromatin component that silences transcription at silent mating loci, telomeres and the ribosomal DNA, and that also suppresses recombination in the rDNA and extends replicative life span. It acts as a NAD-dependent histone deacetylase, which deacetylates ’Lys-9’ and ’Lys-14’ of Histone H3 and ’Lys-16’ of Histone H4 (By similarity) (509 aa)
       
 
  0.602
SIR4
Hypothetical protein (1447 aa)
       
 
  0.593
XP_448288.1
Hypothetical protein (519 aa)
       
 
  0.590
XP_449338.1
Hypothetical protein (748 aa)
       
 
  0.551
SIR3
Hypothetical protein (1088 aa)
       
 
  0.536
XP_446203.1
Hypothetical protein (601 aa)
       
 
  0.522
XP_448056.1
Hypothetical protein (472 aa)
       
 
  0.514
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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