STRINGSTRING
RPN4 protein (Candida glabrata) - STRING interaction network
"RPN4" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPN4Hypothetical protein (499 aa)    
Predicted Functional Partners:
XP_447839.1
Hypothetical protein (620 aa)
       
      0.810
XP_448369.1
Hypothetical protein (602 aa)
       
 
  0.607
XP_449789.1
Hypothetical protein (1476 aa)
       
 
  0.478
XP_447462.1
Hypothetical protein (433 aa)
       
      0.448
XP_446943.1
Hypothetical protein (706 aa)
       
 
  0.431
XP_446439.1
Hypothetical protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (286 aa)
       
 
  0.427
XP_449711.1
Hypothetical protein (462 aa)
     
      0.409
XP_446753.1
Hypothetical protein (361 aa)
     
      0.409
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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