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TIF6 protein (Candida glabrata) - STRING interaction network
"TIF6" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIF6Hypothetical protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export (245 aa)    
Predicted Functional Partners:
XP_446470.2
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
     
 
  0.955
XP_445560.1
Hypothetical protein (246 aa)
   
 
  0.947
NOG1
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (645 aa)
     
 
  0.946
XP_447221.1
Hypothetical protein (519 aa)
     
 
  0.946
XP_449464.1
60S ribosomal protein L5 (297 aa)
     
 
  0.943
RLP7
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit. May act as a specificity factor that binds precursor rRNAs and tethers the enzymes that carry out the early 5’ to 3’ exonucleolytic reactions that generate the mature rRNAs (By similarity) (317 aa)
     
 
  0.940
XP_447971.1
Hypothetical protein (1108 aa)
     
 
  0.940
XP_448146.1
Hypothetical protein (619 aa)
     
 
  0.939
XP_448543.1
60S ribosomal protein L20 (175 aa)
   
 
  0.936
NSA1
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (436 aa)
     
 
  0.936
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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