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SUB2 protein (Candida glabrata) - STRING interaction network
"SUB2" - Hypothetical protein in Candida glabrata
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB2Hypothetical protein; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (439 aa)    
Predicted Functional Partners:
XP_444903.1
Hypothetical protein (232 aa)
     
  0.995
XP_447213.1
Hypothetical protein (1135 aa)
   
  0.982
XP_447951.1
Hypothetical protein (1568 aa)
     
  0.975
CWC2
Hypothetical protein; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases [...] (306 aa)
   
  0.937
XP_445179.1
Hypothetical protein (419 aa)
     
  0.916
XP_446462.1
Hypothetical protein (1057 aa)
     
  0.892
XP_446279.1
Hypothetical protein (768 aa)
     
  0.892
XP_445040.1
Hypothetical protein (708 aa)
       
 
  0.887
XP_447352.1
Hypothetical protein (256 aa)
       
 
  0.879
XP_445736.1
Hypothetical protein (1195 aa)
       
 
  0.870
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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