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DBP5 protein (Candida glabrata) - STRING interaction network
"DBP5" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBP5Hypothetical protein; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity) (504 aa)    
Predicted Functional Partners:
GLM4
Hypothetical protein (1501 aa)
       
 
  0.979
XP_448128.1
Hypothetical protein (530 aa)
     
 
  0.959
XP_446123.1
Hypothetical protein (590 aa)
     
 
  0.937
CWC2
Hypothetical protein; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases [...] (306 aa)
     
 
  0.903
XP_444903.1
Hypothetical protein (232 aa)
     
 
  0.880
XP_445065.1
Hypothetical protein (1087 aa)
     
 
  0.859
XP_445736.1
Hypothetical protein (1195 aa)
     
 
  0.825
MSN5
Hypothetical protein (1221 aa)
     
 
  0.723
XP_447328.1
Hypothetical protein (1051 aa)
     
 
  0.723
XP_446214.1
Hypothetical protein (610 aa)
     
 
  0.627
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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