STRINGSTRING
XP_449688.1 protein (Candida glabrata) - STRING interaction network
"XP_449688.1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_449688.1Hypothetical protein (105 aa)    
Predicted Functional Partners:
XP_447542.1
Hypothetical protein (90 aa)
     
  0.997
XP_446583.1
Hypothetical protein (95 aa)
     
  0.997
XP_002999599.1
Hypothetical protein (85 aa)
     
  0.997
XP_447956.1
Hypothetical protein (117 aa)
     
  0.997
LSM6
Hypothetical protein; Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5’-to-3’ mRNA decay pathway. Component of the nuclear LSM2-LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRNA (U4/U6 di-snRNP, spliceosoma [...] (115 aa)
     
  0.997
XP_446514.1
Hypothetical protein (172 aa)
     
  0.996
XP_002999529.1
Hypothetical protein (76 aa)
     
  0.991
XP_448280.1
Hypothetical protein (151 aa)
     
  0.980
XP_449549.1
Hypothetical protein (99 aa)
     
  0.980
XP_445285.1
Hypothetical protein (165 aa)
     
  0.979
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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