STRINGSTRING
VIP1 protein (Candida glabrata) - STRING interaction network
"VIP1" - Hypothetical protein in Candida glabrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIP1Hypothetical protein (1128 aa)    
Predicted Functional Partners:
XP_445590.1
Hypothetical protein (294 aa)
       
      0.810
XP_445605.1
Hypothetical protein (1053 aa)
     
 
  0.640
XP_449441.1
Hypothetical protein (672 aa)
       
 
  0.474
XP_449606.1
Hypothetical protein (410 aa)
     
      0.454
XP_444942.1
Hypothetical protein (583 aa)
     
      0.448
PFY1
Hypothetical protein; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (126 aa)
       
      0.448
XP_445830.1
Hypothetical protein (425 aa)
       
      0.443
POB3
Hypothetical protein; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the [...] (543 aa)
     
      0.440
XP_446954.1
Hypothetical protein (474 aa)
       
      0.437
XP_447078.1
Hypothetical protein (868 aa)
     
      0.433
Your Current Organism:
Candida glabrata
NCBI taxonomy Id: 284593
Other names: C. glabrata, C. glabrata CBS 138, Candida glabrata, Candida glabrata ATCC 2001, Candida glabrata ATCC2001, Candida glabrata CBS 138, Candida glabrata CBS138, Nakaseomyces, Torulopsis glabrata, m. Nakaseomyces, mitosporic Nakaseomyces
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