STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtf2Uncharacterized protein C5D6.12. (314 aa)    
Predicted Functional Partners:
mrpl39
54S ribosomal protein L39, mitochondrial.
   
   0.806
rsm7
37S ribosomal protein S7, mitochondrial.
   
 
 0.795
mrp5
Probable 37S ribosomal protein S5, mitochondrial.
   
 
 0.794
rsm25
37S ribosomal protein S25, mitochondrial.
   
 
 0.788
mrp21
37S ribosomal protein mrp21, mitochondrial; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.788
mrp4
37S ribosomal protein mrp4, mitochondrial; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.787
rsm19
Probable ribosomal protein S19, mitochondrial.
   
 
 0.774
mrps28
Probable 37S ribosomal protein S28, mitochondrial; Essential component of the small mitochondrial ribosomal subunit; Belongs to the universal ribosomal protein uS15 family.
   
   0.770
mrp20
54S ribosomal protein L23, mitochondrial; Involved in mitochondrial genome encoded proteins translation.
   
 
 0.770
rsm18
37S ribosomal protein rsm18, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.767
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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