STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps180240S ribosomal protein S18-B; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA. (152 aa)    
Predicted Functional Partners:
rps29
40S ribosomal protein S29; Belongs to the universal ribosomal protein uS14 family.
  
 0.998
rps2402
40S ribosomal protein S24-B.
   
 0.997
rps1002
40S ribosomal protein S10-B.
   
 0.996
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.994
rps20
40S ribosomal protein S20; Belongs to the universal ribosomal protein uS10 family.
  
 0.994
rps1601
40S ribosomal protein S16-A.
  
 0.994
rps2801
40S ribosomal protein S28-A.
   
 0.994
rps13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.994
rps2
40S ribosomal protein S2.
  
 0.993
elf1
mRNA export factor elf1; Has a direct role in the mRNA export process. Appears to act within the rae1 mediated mRNA export pathway. Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
   
 
 0.992
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.