STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcp5Uncharacterized protein C18B11.06. (327 aa)    
Predicted Functional Partners:
utp6
U3 small nucleolar RNA-associated protein 6; Component of the SSU processome, a pre-ribosomal particle required for the maturation of the 18S rRNA from the 35S pre-rRNA precursor.
   
 0.999
enp2
Ribosome biogenesis protein enp2 homolog; May be involved in rRNA-processing and ribosome biosynthesis.
   
 0.999
utp18
Probable U3 small nucleolar RNA-associated protein 18; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
mis3
KRR1 small subunit processome component homolog; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
utp14
Uncharacterized protein C57A7.06.
   
 0.998
utp11
Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.998
pwp2
Periodic tryptophan protein 2 homolog; Belongs to the WD repeat PWP2 family.
   
 0.998
utp7
Probable U3 small nucleolar RNA-associated protein 7; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.998
rrp9
Uncharacterized WD repeat-containing protein C2E1P5.05.
   
 0.998
utp10
U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t- UTPs). Involved in ribosome biosynthesis (By similarity).
   
 0.997
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.