STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tuf1Elongation factor Tu, mitochondrial; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (439 aa)    
Predicted Functional Partners:
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
rtc6
54S ribosomal protein c83.06c, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
tsf1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 
 0.999
mrps16
Probable 37S ribosomal protein S16, mitochondrial.
  
 
 0.998
rpl35
60S ribosomal protein L35; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.998
mrpl8
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
mrpl32
Probable 54S ribosomal protein L32, mitochondrial; Component of the large subunit of mitochondrial ribosome. Belongs to the bacterial ribosomal protein bL32 family.
   
 
 0.998
rpl26
60S ribosomal protein L26; Belongs to the universal ribosomal protein uL24 family.
  
 
 0.998
SPCC777.17c
Probable 54S ribosomal protein L9, mitochondrial.
  
 
 0.998
mrp17
37S ribosomal protein MRP17, mitochondrial; Belongs to the bacterial ribosomal protein bS6 family.
  
 
 0.998
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.