STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYQ_ENCCUProbable glutamine--tRNA ligase. (697 aa)    
Predicted Functional Partners:
SYP_ENCCU
Proline--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 0.994
Q8SVQ7_ENCCU
tRNA-binding domain-containing protein.
  
 0.975
SYKC_ENCCU
Probable lysine--tRNA ligase, cytoplasmic.
  
 0.960
SYIC_ENCCU
Probable isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.951
SYLC_ENCCU
Probable leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.948
SYMC_ENCCU
Probable methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.944
SYR_ENCCU
Arginine--tRNA ligase.
  
 0.937
Q8SRQ3_ENCCU
60S RIBOSOMAL PROTEIN L5.
  
 0.911
Q8SRU1_ENCCU
60S RIBOSOMAL PROTEIN L30.
   
 0.911
Q8SSF7_ENCCU
60S RIBOSOMAL PROTEIN L9.
  
 0.911
Your Current Organism:
Encephalitozoon cuniculi
NCBI taxonomy Id: 284813
Other names: E. cuniculi GB-M1, Encephalitozoon cuniculi GB-M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.