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Phatr10073 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10073" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10073Predicted protein (431 aa)    
Predicted Functional Partners:
Phatr15917
Cystathionine gamma-lyase (392 aa)
   
 
  0.915
Phatr42129
Annotation not available (479 aa)
       
  0.908
Phatr22113
Bifunctional aspartokinase (870 aa)
   
  0.902
Phatr49644
Predicted protein (516 aa)
         
    0.900
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
  0.887
Phatr24739
Predicted protein (1594 aa)
   
  0.887
Phatr10257
Predicted protein (459 aa)
   
   
 
0.810
ACC2
Biotin carboxylase (2282 aa)
   
 
  0.735
GDCP
Glycine decarboxylase p-protein (1005 aa)
       
  0.730
Phatr17238
Anthranilate synthase (958 aa)
   
 
  0.727
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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