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Phatr10100 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10100" - Annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10100Annotation not available (1250 aa)    
Predicted Functional Partners:
chlM
Magnesium-protoporphyrin IX methyltransferase (258 aa)
 
 
  0.981
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
 
 
  0.975
PPO
Protoporphyrinogen oxidase (520 aa)
   
 
  0.933
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
       
  0.928
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
   
   
0.817
Phatr9984
Predicted protein (249 aa)
   
 
  0.688
Phatr31683
Predicted protein (426 aa)
 
   
  0.603
Phatr12807
Predicted protein (326 aa)
 
   
  0.582
Phatr49415
Predicted protein (586 aa)
         
  0.533
Phatr42902
Predicted protein (1343 aa)
         
  0.533
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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