STRINGSTRING
Phatr10104 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10104" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10104Predicted protein (244 aa)    
Predicted Functional Partners:
Phatr46289
Predicted protein (338 aa)
     
  0.922
ACC2
Biotin carboxylase (2282 aa)
       
  0.898
Phatr47992
Predicted protein (432 aa)
     
  0.862
ACC1
Acetyl-coa carboxylase (2092 aa)
       
  0.793
MYT1
Predicted protein (1108 aa)
       
 
  0.784
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
       
  0.766
Phatr47178
Predicted protein (182 aa)
       
  0.765
Phatr44512
Predicted protein (340 aa)
       
  0.765
Phatr13833
Predicted protein (443 aa)
       
  0.765
Phatr5651
14-3-3-like protein (241 aa)
       
  0.751
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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