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Phatr10196 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10196" - Ribosomal protein L37 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10196Ribosomal protein L37; Binds to the 23S rRNA (90 aa)    
Predicted Functional Partners:
Phatr19314
Predicted protein (125 aa)
   
 
  0.979
Phatr21659
Predicted protein (136 aa)
     
 
  0.979
Phatr11032
Predicted protein (115 aa)
     
 
  0.972
Phatr19413
Predicted protein (69 aa)
     
 
  0.971
Phatr28147
Predicted protein (62 aa)
     
 
  0.971
Phatr43840
Predicted protein (110 aa)
   
  0.954
rps19
Predicted protein (147 aa)
     
  0.950
Phatr17846
Predicted protein (145 aa)
     
  0.945
Phatr23687
Predicted protein (106 aa)
     
  0.938
Phatr47804
Predicted protein (94 aa)
   
  0.926
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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