STRINGSTRING
Phatr10251 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10251" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10251Predicted protein (306 aa)    
Predicted Functional Partners:
Phatr43677
Predicted protein (813 aa)
     
 
  0.517
Phatr38965
Predicted protein (1383 aa)
     
 
  0.517
Phatr26775
Predicted protein (593 aa)
     
 
  0.517
Phatr23306
Predicted protein (908 aa)
     
 
  0.517
Phatr45727
Predicted protein (948 aa)
     
 
  0.421
Phatr50326
Predicted protein (998 aa)
     
   
  0.419
Phatrdraft920
Predicted protein (575 aa)
     
 
  0.403
Phatr47365
Predicted protein (603 aa)
     
 
  0.403
Phatr39714
Predicted protein (531 aa)
     
 
  0.403
Phatr27821
Predicted protein (822 aa)
     
 
  0.403
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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