STRINGSTRING
Phatr10458 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10458" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10458Predicted protein (171 aa)    
Predicted Functional Partners:
Phatr3362
Predicted protein (322 aa)
       
      0.540
PHATR_3140
Predicted protein (196 aa)
         
  0.534
Phatr19324
Predicted protein (554 aa)
              0.526
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
   
   
  0.520
Phatr21369
Predicted protein (308 aa)
       
  0.511
Phatr8365
Predicted protein (76 aa)
   
 
  0.462
Phatr28730
Predicted protein (115 aa)
   
 
  0.462
Phatr27286
Predicted protein (163 aa)
   
 
  0.462
Phatr12294
Predicted protein (92 aa)
   
 
  0.462
HSP70G
Protein heat shock protein (901 aa)
     
 
  0.446
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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