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STRINGSTRING
Phatr10524 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10524" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10524Predicted protein; Belongs to the AAA ATPase family (256 aa)    
Predicted Functional Partners:
Phatr12799
Prohibitin-like protein (244 aa)
     
 
  0.651
Phatr18202
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family (882 aa)
   
 
  0.592
Phatr10835
Predicted protein; Translation initiation factor IF-2 (579 aa)
 
   
  0.500
Phatr31465
Predicted protein (679 aa)
     
 
  0.473
Atp1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (509 aa)
     
 
  0.473
Phatr54960
Predicted protein (269 aa)
     
 
  0.449
Phatr54958
Prohibitin-like protein (284 aa)
     
 
  0.449
Phatr16182
Predicted protein; Belongs to the AAA ATPase family (514 aa)
   
 
0.402
Phatr35318
Predicted protein (327 aa)
     
   
  0.401
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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