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STRINGSTRING
Phatr10617 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10617" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10617Predicted protein; Belongs to the universal ribosomal protein uL3 family (229 aa)    
Predicted Functional Partners:
Phatr14713
Predicted protein (137 aa)
 
 
  0.996
Phatr9894
Predicted protein (140 aa)
 
 
  0.995
Phatr12238
Predicted protein (184 aa)
   
 
  0.993
Phatr11799
Predicted protein (84 aa)
     
 
  0.985
Phatr37579
Predicted protein (335 aa)
     
      0.978
Phatr37018
Predicted protein (154 aa)
     
 
  0.975
Phatr30486
Predicted protein; Belongs to the universal ribosomal protein uS13 family (146 aa)
   
 
  0.952
Phatr8024
Predicted protein; Belongs to the universal ribosomal protein uL22 family (112 aa)
   
 
  0.949
Phatr9554
Predicted protein (78 aa)
   
 
  0.939
Phatr5769
Predicted protein (190 aa)
 
 
  0.925
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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