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STRINGSTRING
Phatr10628 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10628" - Serine/threonine-protein kinase PLK in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10628Serine/threonine-protein kinase PLK (575 aa)    
Predicted Functional Partners:
Phatr10954
Predicted protein (209 aa)
     
 
  0.979
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
 
  0.971
Phatr48451
Separase protein (2039 aa)
     
 
  0.967
cdc14
Predicted protein (298 aa)
     
 
  0.966
MYT1
Predicted protein (1108 aa)
     
 
  0.961
APC3
Predicted protein (336 aa)
     
 
  0.954
SMC3
Predicted protein (1232 aa)
     
 
  0.954
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
 
  0.945
Phatr48134
Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (946 aa)
     
 
  0.941
Phatr43122
MAP65_ASE1 (620 aa)
     
 
  0.932
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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