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Phatr10628 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10628" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10628Predicted protein (575 aa)    
Predicted Functional Partners:
SMC1
Predicted protein (1237 aa)
     
  0.971
cdc14
Predicted protein (298 aa)
     
 
  0.970
Phatr43757
Cyc-like protein (491 aa)
     
  0.896
dsCYC5
Predicted protein (297 aa)
     
  0.896
CYCA/B_1
Predicted protein (234 aa)
     
  0.896
Phatr48451
Separase protein (2039 aa)
     
  0.889
Phatr54417
Cohesin (1455 aa)
     
  0.888
Phatr45416
Predicted protein (632 aa)
     
  0.877
Phatr44595
Mitotic cohesin (663 aa)
     
  0.862
Phatr50489
Predicted protein (387 aa)
     
0.860
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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