STRINGSTRING
Phatr10722 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10722" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10722Predicted protein (153 aa)    
Predicted Functional Partners:
Phatr15481
Predicted protein (482 aa)
     
    0.971
Phatr13820
Predicted protein (282 aa)
     
 
    0.970
Phatr25549
Predicted protein (512 aa)
   
 
0.965
Phatr14161
Helicase_3 (540 aa)
   
 
0.964
Phatr9989
Predicted protein (620 aa)
   
 
0.963
Phatr7810
Predicted protein (98 aa)
     
 
  0.960
Phatr11894
Predicted protein (209 aa)
     
      0.960
Phatr51897
Predicted protein (531 aa)
     
        0.958
Phatr45828
Predicted protein (805 aa)
     
        0.958
Phatr19647
Predicted protein (354 aa)
     
        0.958
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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