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Phatr10724 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10724" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10724Predicted protein (169 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
       
  0.831
SUMO
Small ubiquitin-like modifier (103 aa)
       
  0.813
Phatr12578
Predicted protein (68 aa)
       
  0.813
Rbx1
Predicted protein (134 aa)
       
  0.780
Phatr20308
Predicted protein (148 aa)
     
  0.773
Phatr45431
Predicted protein (1158 aa)
       
  0.744
Phatr54869
Predicted protein (445 aa)
       
  0.738
sUbi
Ubiquitin-like protein (268 aa)
     
  0.721
hUbi
Predicted proteinUbiquitin extension protein 4 (381 aa)
     
  0.721
Phatr49037
Predicted protein (205 aa)
     
  0.721
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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