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Phatr10799 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10799" - Malonyl-coa decarboxylase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10799Malonyl-coa decarboxylase (326 aa)    
Predicted Functional Partners:
Phatr23467
Dehydrogenase methylmalonate-semialdhyde dehydrogenase (537 aa)
     
 
    0.902
Phatr23913
Acetyl-coa c-acetyltransferase (396 aa)
         
    0.900
ACC2
Biotin carboxylase (2282 aa)
         
  0.862
Phatrdraft1828
Predicted protein (477 aa)
         
    0.832
Phatr38009
Predicted protein (230 aa)
         
    0.832
DHLTA_3
Dihydrolipoamide acetyl transferase (477 aa)
         
    0.832
DHLTA_1
Dihydrolipoamide acetyltransferase (492 aa)
         
    0.832
DHLTA_2
Dihydrolipoamide acetyl transferase (435 aa)
         
    0.832
ACC1
Acetyl-coa carboxylase (2092 aa)
         
  0.814
Phatrdraft645
Acetyl-coenzyme A synthetase (732 aa)
         
  0.814
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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