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ZEP3 protein (Phaeodactylum tricornutum) - STRING interaction network
"ZEP3" - Zeaxanthin epoxidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZEP3Zeaxanthin epoxidase (391 aa)    
Predicted Functional Partners:
VDE
Violaxanthin deepoxidase (262 aa)
         
  0.902
ZEP2
Precursor of protein zeaxanthin epoxidase-like protein (192 aa)
   
   
0.822
ZEP1
Zeaxanthin epoxidase (565 aa)
         
0.810
chlM
Magnesium-protoporphyrin IX methyltransferase (258 aa)
     
  0.744
Phatr9984
Predicted protein (249 aa)
     
  0.680
Phatrdraft870
Predicted protein (457 aa)
       
  0.589
Phatr43315
Predicted protein (436 aa)
       
  0.589
Phatr22909
Predicted protein (443 aa)
       
  0.589
Phatr10418
Predicted protein (375 aa)
       
  0.589
Phatr10257
Predicted protein (459 aa)
       
  0.589
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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