STRINGSTRING
Phatr10976 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr10976" - Mannosyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr10976Mannosyltransferase (370 aa)    
Predicted Functional Partners:
Phatr44574
Predicted protein (556 aa)
       
  0.978
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
       
  0.962
Phatr54621
Glycosyl transferase, family 1 (433 aa)
       
  0.943
Phatr44790
Predicted protein (586 aa)
         
  0.880
Phatrdraft1666
Predicted protein (558 aa)
     
 
  0.872
Phatr18303
Mannosyl transferase (487 aa)
         
  0.871
Phatr44425
Alpha-mannosyltransferase (581 aa)
       
  0.855
Phatr44117
Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (532 aa)
       
 
  0.798
Phatr47245
Predicted protein (480 aa)
       
 
  0.774
Phatr45980
Predicted protein (348 aa)
       
 
  0.774
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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