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Phatr11021 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11021" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11021Predicted protein (323 aa)    
Predicted Functional Partners:
Phatr9476
Predicted protein (341 aa)
  0.999
DHLTA_4
Dihydrolipoamide acetyl transferase (525 aa)
  0.995
PDHA1
Precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (413 aa)
  0.995
pDLDH1
Lipoamide dehydrogenase (543 aa)
   
  0.989
DLDH
Dihydrolipoyl dehydrogenase (500 aa)
   
  0.989
PDH1
Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits (325 aa)
  0.985
Phatr43697
Branched-chain-amino-acid aminotransferase (356 aa)
     
  0.938
Phatr32849
Predicted protein (299 aa)
     
  0.938
Phatr28585
Branched-chain-amino-acid aminotransferase (326 aa)
     
  0.938
Phatr10779
Predicted protein (359 aa)
     
  0.938
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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