STRINGSTRING
Phatr11145 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11145" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11145Predicted protein (325 aa)    
Predicted Functional Partners:
Phatr29958
Predicted protein (251 aa)
     
  0.995
Phatrdraft1638
Predicted protein (548 aa)
     
  0.978
Phatr16704
Predicted protein (1045 aa)
     
  0.974
Phatr13192
Predicted protein (74 aa)
     
  0.972
Phatr46169
Predicted protein (520 aa)
     
 
  0.945
Phatr54743
Predicted protein (347 aa)
     
  0.893
Phatr9806
Predicted protein (195 aa)
     
  0.869
Phatr49469
Predicted protein (522 aa)
     
  0.863
Phatr14572
Predicted protein (219 aa)
     
  0.855
Phatr8270
Predicted protein (84 aa)
       
  0.852
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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