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Phatr11154 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11154" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11154Predicted protein (105 aa)    
Predicted Functional Partners:
Phatrdraft1610
Predicted protein (279 aa)
   
 
  0.776
Phatrdraft1259
Predicted protein (279 aa)
   
 
  0.776
Phatr7342
Predicted protein (106 aa)
   
 
  0.776
Phatr14478
Predicted protein (112 aa)
   
 
  0.776
Phatr7780
Predicted protein (122 aa)
   
   
  0.735
Phatr47958
Predicted protein (312 aa)
   
 
  0.729
Phatr14307
Predicted protein (90 aa)
   
 
  0.729
sufD
FeS assembly protein suf (690 aa)
   
 
  0.703
IscU
Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
   
   
  0.672
Phatr45826
Predicted protein (238 aa)
   
   
  0.667
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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