STRINGSTRING
Phatr11174 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11174" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11174Predicted protein (627 aa)    
Predicted Functional Partners:
Phatr12107
Predicted protein (460 aa)
   
   
  0.681
ACC2
Biotin carboxylase (2282 aa)
         
  0.655
Phatr49253
Predicted protein (566 aa)
   
 
  0.606
Phatr29217
Predicted protein (406 aa)
   
   
  0.561
Phatrdraft561
Methionine aminopeptidase (363 aa)
   
   
  0.560
Phatr24514
Methionine aminopeptidase (326 aa)
   
   
  0.560
Phatr12595
Methionine aminopeptidase (357 aa)
   
   
  0.560
Phatr232
Predicted protein (986 aa)
   
      0.556
Phatr51058
Predicted protein (255 aa)
       
      0.547
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
       
      0.547
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (3%) [HD]