• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr11197 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11197" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11197Predicted protein (93 aa)    
Predicted Functional Partners:
Phatr8310
Predicted protein (77 aa)
 
        0.835
Phatr16334
Predicted protein (223 aa)
   
        0.470
FtrB
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (121 aa)
   
        0.464
Phatr42329
Predicted protein (238 aa)
   
        0.454
Phatr43556
Predicted protein (249 aa)
   
        0.453
Phatr8301
Predicted protein (80 aa)
   
        0.452
Phatr16471
Predicted protein (207 aa)
   
        0.447
Phatr46071
Predicted protein (180 aa)
   
        0.446
Phatr14996
Predicted protein (85 aa)
   
        0.438
Phatr40135
Predicted protein (461 aa)
   
        0.430
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (12%) [HD]