STRINGSTRING
Phatr1129 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr1129" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr1129Predicted protein (562 aa)    
Predicted Functional Partners:
Phatr50770
Predicted protein (549 aa)
  0.955
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
   
 
  0.938
Phatr8975
Predicted protein (350 aa)
   
  0.932
Phatr36821
Predicted protein (386 aa)
   
  0.932
Phatr3262
Predicted protein (220 aa)
         
    0.900
Phatr42962
2-phosphoglycerate dehydratase (589 aa)
       
  0.870
Phatr1971
Predicted protein (492 aa)
         
  0.855
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
  0.848
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
   
 
  0.826
Phatr42446
Predicted protein (315 aa)
   
 
  0.826
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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