STRINGSTRING
Phatr11308 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11308" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11308Predicted protein (89 aa)    
Predicted Functional Partners:
Phatr17772
Predicted protein (1313 aa)
   
      0.940
ACL
Atp-citrate synthase (1082 aa)
   
 
  0.859
Phatr47992
Predicted protein (432 aa)
       
  0.835
Phatr23164
Predicted protein (489 aa)
 
  0.803
Phatr13360
Predicted protein (226 aa)
     
  0.769
Phatr15709
Predicted protein (100 aa)
       
  0.768
Phatrdraft1638
Predicted protein (548 aa)
     
  0.756
Phatr26061
Predicted protein (552 aa)
     
  0.754
Phatr20588
Predicted protein (87 aa)
       
  0.754
Phatr16704
Predicted protein (1045 aa)
     
  0.748
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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