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DER1 protein (Phaeodactylum tricornutum) - STRING interaction network
"DER1" - Peroxisomal 2,4-dienoyl-CoA reductase in Phaeodactylum tricornutum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DER1Peroxisomal 2,4-dienoyl-CoA reductase (296 aa)    
Predicted Functional Partners:
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
  0.778
Phatr35240
Predicted protein (684 aa)
   
  0.778
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
       
  0.706
ACC1
Acetyl-coa carboxylase (2092 aa)
     
  0.696
Phatr44982
Predicted protein (203 aa)
   
  0.689
ACC2
Biotin carboxylase (2282 aa)
     
  0.675
KCT1
Beta-ketoacyl-coa thiolase (386 aa)
   
 
  0.653
FABB
3-oxoacyl-[acyl-carrier-protein] synthase (427 aa)
     
  0.651
FABFa
3-oxoacyl-[acyl-carrier-protein] synthase (433 aa)
     
  0.651
FABFb
3-oxoacyl-[acyl-carrier-protein] synthase (457 aa)
     
  0.651
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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